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Species belonging to selected taxon:

Picea glauca



ABOUT THIS RECORD

ID: MNEST055387
species: Picea glauca
miRNA family: miR3710
source: miRNEST

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGGAACCTGACGGGCCTCCA

miRNA*
GAAACCTGACGGGCCTCCAAA

mismatches: 5
bulges: 0

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pre-miRNA
CCAGACTCGGTTGGGAACCTGACGGGCCTCCAAACGCTTGACTTGCGCGGGTGCTCCACTCTGCAGACGTTCCCAGACTCGGTTGGGAACCTGACGGGCC
TCCAAACGCTTGACTTGAGCTGGTGGTCCACTCTGCAGACGCTCCCAGACTCGGTTGGAAACCTGACGGGCCTCCAAACGCTTGAC


dot-bracket secondary structure
.(((...((.(((((..((((.((((..(((((.....(((.((....(((.((.....((((((((.((((((((......)))))))).....(((((
.(((...((((.....))))))).)))))..)))))))).)).))).)).))).)))))..)))).))))..))))).)).)))..



SIMILARITIES
miRBase pta-MIR1315: 4e-39

PMRD pta-miR1315: 4e-39

microPC no hits
UniProt sp|Q6UWE0|LRSM1_HUMAN: 0.000004

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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